Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015810355.1_cds_XP_016496167.1_10417
CDS Infomation	[gene=LOC107815166] [db_xref=GeneID:107815166] [protein=putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C] [protein_id=XP_016496167.1] [location=complement(join(39718..39972,40209..40475,40606..42138,42292..42456,42580..42706,42837..43171,43269..43979,44716..45060,45143..45296,45420..46214,47090..47607))] [gbkey=CDS]
Sequence	ATGGGAGTACCTGATAGTTCACTGCTGGATTTGATAGAGAAGGTTAGGACTTGGATATCG TGGGGTATGAGTGATCCAACTTTATTGGCTGGCGGACGCGATATGGATGTTAACAGTTGC AAAACCTGTTATGAATGCAAGATGAAGTTTACTGATTCTTGCCTCAAGTTCCATTGCTTA AGATGCAGTCGAGTATTCTGCAATGATTGTGTGCGCATTTTTGGCTCTTCGGATGTTGTT GCTTCTGGATCAGGAGAATCAGAAACCTTGGTGAGGGCTGTGGTTGATATCAAGACTTGC AAATTTTGTTCTGACTTGAGCAATTGTCATAAAAGCATGAGGAAGTTTAGTGACAAAGTT TATCCTTCTGAATCTCCGAGAGAAAGCCCAGAACCGCCGTCACCAGATTTTAGTAGTGAC AGATTTGATGGTGATTCTCCACATGATGCAAGTAAGAGTAGTTTTACAGCCTTTTCAAGT CATCCATCTTCAGTGTCTTTGCGTCACTCGCCTAGCAGGAGTGATGAAGATGAAGGAGGG GACTTCATGGATCATTCTTTTAGCGCATCAAGTGACTATTGTCATGATACTTCTGATATA GAATCAAGTAGTGTTAGTACTAGACATGAATTTTACCGTTTCAGATCAGTTGGATCTAGT CCTTCAAAAAGCCCCTCTAGGATTCGTTTTATTTCCAATAGAGTTGGGCATTCTGTACAG CACCAACAAGAGACCCCAATGTCTCGGAATGATGGTCCCCTTGATCATGAAGCGTCAACT GTTTTAGGAAGGCTTGAGAAAGGAAATGAGGATCCAGAGACTGCTGACGACTGTGTTGAC AATTTGTCCATTTACCAAGACCAGTTTGAGAAGCAGCAAAAACCATTGGATTTTGAAAAC AATGGTCGTCTATGGTTTCCTCCTCCACCTGATGATGAAGATGACGAGGCACAAAATAAT TTCTTTACATATGATGACGAGGATGATGAAATTGGAGAGAGTTCTGCAGCATTTTCTTCC AGTGGGAGCCTTGCCAGCATTTTCCCTGCAAAGGAGAAACAGCAAGCGGATCACAAGGAA CCATTACGAGCTGTTGTACACGGTCATTTCAGGGCTCTTGTCTTGCAGCTATTGCAAGGT GAAGGTATAAATTCAGGGAAGGAAGGCAGCACTGATGACTGGATTGACATAGTTACATCA ATAGCATGGCAAGCTGCAAATTATGTGAAGCCAGATACTAGTAAAGGAGGCAGCATGGAT CCAGGTGATTATGTAAAGGTCAAGTGCATAGCTTCAGGAAGCCAAAGTGAAAGCACCCTC GTTAAAGGAGTAGTTTGTACTAAGAATATCAAACACAAGCGCATGACTTCACAGTACAAA AATGCCCGATTACTTATTTTACGAGGAGCACTTGAGTACCAAAGAGCTGCCAATCAGTTG GCATCTTTTGACACCTTATTGCAACAGGAAAAGGAGCACCTGAAGATGATCGTTTCAAGA ATAGAGGCTCACCATCCTAATGTGCTGCTTGTGGAGAAAAGCGTCTCTTCATATGCTCAG GAGCTTCTACTGGCAAAAGAGATCTCTTTGGTGTTAAATGTTAAGGGGCCACTGCTAGAG AGGATAGCCAGGTGCACTGGTGCTCTTGTAACCCCATCCATTGATAACATAGCCACAACA AGATTGGGACATTGCGAACTCTTCCACTTAGAAAAAGTTTCTGAAGAGCATGAACATGCC AACCAGTTAAACAAGAAGCCATCAAAAACTTTGATGTTTTTTGATGGTTGTCCTAGGCGT TTAGGTTGCACGGTCTTGCTAAGGGGCTCATGTCGTGAAGAGCTGAAGAAGCTGAAGAAG GTCATTCAGTATGCTGTATTTGCTGCATATCATCTGTCTCTTGAGACATCGTTCCTTGCT GATGAGGGTGCTAGTCTACCTAAAGCGTCTGCAGCACTCGAGAGTACATCTGCTGATAAT GCTATCTCAGCGATTTCTCATTCTGCTGTGGCTGCAAGAGCGCAGACAGTTGCAAATGAC CCACATGTTCAACTAGGATCTGCCAATTGCAGTGTGAAGGTAGTTTTACCAGAGTCATTG TTGGAGCATCATTACCCTCAATGCGGCGATCAATCTAACCTAGATGACTGTGGAGCAAGA GATGTTCTCTCTACTGCAGGTCTTGAAAATCTAGCACCGTTTCTTGCGCATGATACAAGA ACTGTTGATTTTGTTGAAATCAAAGATCAAACTGATGAAGGATCGCTAGAAACTTTAGGT CAAGAAGAGAGTCAGCCCGGAGAACTTGGGGAGCTGGCAAAGCTTGAAAAGTCAGATGAA AACAAAGCCCCCAATGAATTCTATTCAGCTGCTGACAGTCGTCAAAGCATATTAGTTTCC TTCTCTAGTCGATGTGTTTTAAATGGAAGTGTGTGTGAACGTTCTCGGCTCCTTCGCATC AAGTTCTATAGCTCTTTTGATAAACCACTTGGGCGATATCTTCAGGATGATCTTTTTGGT CAGATGTCTTCCTGTCAATCATGCAAGGAGCCAGCTGAGGCTCATGTCATCTGCTATACA CACCAACAGGGGAATCTTACCATAAATGTTAGACGCCTTCCCTCGGTGAGTTCGCTTCCT GGTGAACGGGACAAAAAGATTTGGATGTGGCATCGATGTCTTAAGTGTGCACAAATAGAG GGAGTTCCACCAGCGACTCGCAGAGTAATAATGTCAGATGCTGCTTGGGGACTCTCGTTT GGGAAGTTCTTGGAACTTAGTTTTTCAAATCATGCAACTGCTAACCGTGTTGCTAGCTGT GGTCATTCTCTGCAAAGAGACTGCCTCCGATATTATGGGTGTGGAAGTATGGTTGCGTTC TTCCGCTATTCTCCTATTGACATTCTGTCAGTTCGTCTGCCCCCATTAACTCTTGAATTT AGTGGCTACACAGAACAAGAATGGCTAAGGAAAGAAGCAGCTGAGTTACTATGTAAAGCC AAAGCTTTGTACGCGGAAATATCAAGTGCCTTTCGCAGGATTGAAGAGAAAAGTTCCTCT TTAGAATGTGAGCTATCAGATACAACTCAGTTGAATGACTGCATCATGGAGTTAAAGGAG CTGCTTATGAAAGAAAAGAATGATTACTATGACTTTCTTCAACCGGATGATGAAGAAACT TTTGACCCAAGGCAGGCTGCAATAGACATTCTTGAGCTGAATCGCTTGAGGCACTCCCTC GTGATTGCTTCGCATGTTTGGGATCGTCGGCTTTTGTCCGTGAAGTCTTTTCTTGAAAAG AGTTCTAGTTCAGTGGGTTCAGAGGATTCTGGATCTTGTAATGAGCTGATAGATTGGAGG AGGGACATGTTTCTGAAGAATGACACTCTTGAACATGTTTATGAAGAATCTGTGCCCGAG TTCTCAGACTTAGAAGAATATACCGAGAAAGCTTTGCAGTCCGAACAGGAGGAAACTCGC GTATCACCTTATGGTTCTGTTAAGATCGAAAGCTCCATGTTAACCTCATCTGAGAGTGAG AGAACGCAGGAAATGCAGATGGAAGGAGAGAATGTGGTTACTGAAACATCCTTGGCACGA GCTCCTTCAGCTGCATCAGCCCTTTCTGATCAGATAGATTCTGCTTGGACTGGCACAGAT CGATCTCCCAAAAAAGGTCAGTTGTTTCTGATGCTACAAGGAGAAGGATCTGAAGCTGCT TCTTTCAGACCACCAAGTCAACTTGATTTCCCTCCTTTTAGAAAGCTACGGTCACCCGCA AGAGTTCACTCCTTTGACTCTGCTCTGAGACTTCAGGAAAGAATCAGGAAGGGACTGCCG CCTTCTTCATTACATTTATCAACAATTAGGTCTTTTCATGCTTCTGGTGACTACAGGAAT ATGATCAGAGACCCTGTTTCCAGTGTTCAGAGAAGTTATTCTCAGATGTCACCTAGTGAA GCTCATAAGTTTAATCTTCTTATGGGTTCATCACCCTCGTTTATTTCTTATGCATCTCTT ATACCTGACGGAGCTAGGTTGATGGTTTCACAGGGAGATGTTGTGGTAGCTGTTTATGAC AACGAACCTACTAGCATAATATCTTATGCACTTTGTTCTAAAGTGTATAATGATTGCATC ACTGATAAGTCAAGCGTGTCTGGACGGGGTTGGAACACAAGTGACATCAATAAGGAGGCT GGAGTGGCTCCTCGCCTCTCGGCATGGCAGTCTTTTGGCTCCCTTGACATGGATTATATG CATTATGGTAGCTATGGTTCTGAAGATGCTTCCAGTACAATTACTTCCCTATTTGCAGAT TCAAAAAGTTCTCCTCACCTAAGGGTCTCTTTTGATGACGAATCTTCGAGTGCTGGGGGA AAGGTCAAATTTTCTGTCACTTGTTACTTTGCAAAGCAGTTTGATGCTCTTAGGAGGAAG TGCTGTCCTGATGAACTGGATTTTGTACGTTCCTTAAGCCGTTGCAAAAGATGGAGTGCT CAAGGGGGAAAGAGCAATGTTTATTTTGCCAAGTCATTGGATGAAAGATTCATAATAAAA CAAGTTCAGAAAACTGAGTTGGACTCTTTTGAAGAATTTGCACCAGAGTATTTTAAATAT ATAACAGATTCTATTAACTCACGGAGTCCAACTTGCCTTGCAAAAGTTCTCGGAATATTC CAGGTTTCGGTCAAACACTTGAAAGGCGGCAGGGAAACAAAAATGGATTTAATTGTGATG GAGAATCTCTTTTTTGAAAGAAAGATCTCGAGGGTCTATGATCTCAAGGGTTCTTTACGA TCTCGCTACAATGCAGATACAACTGGGGCAAACAAAGTGTTGCTAGATATGAATCTTTTA GAAACATTGCATACCAAACCTATATTTCTTGGAAGCAAAGCAAAAAGAAGCCTGGAGCGA GCTGTTTGGAATGATACATCCTTTTTGGCATCTGTTGATGTGATGGACTACTCTTTGCTG GTTGGAGTTGACGAAGAGCGAAAGGAGTTAGTCTTGGGCATCATAGACTTCATGAGACAA TATACTTGGGACAAGCACTTAGAGACATGGGTGAAGGCATCCGGCATACTTGGAGGACTG AAGAATGAATCCCCGACTATTGTTTCTCCACTACAATACAAGAAAAGATTCAGAAAAGCG ATGACAACCTATTTTCTCACGGTACCAGATCAATGGTCATCTTGA

Peptide Sequence

PEP ID	XP_016496167.1
PEP Infomation	PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Nicotiana tabacum]
Sequence	MGVPDSSLLDLIEKVRTWISWGMSDPTLLAGGRDMDVNSCKTCYECKMKFTDSCLKFHCL RCSRVFCNDCVRIFGSSDVVASGSGESETLVRAVVDIKTCKFCSDLSNCHKSMRKFSDKV YPSESPRESPEPPSPDFSSDRFDGDSPHDASKSSFTAFSSHPSSVSLRHSPSRSDEDEGG DFMDHSFSASSDYCHDTSDIESSSVSTRHEFYRFRSVGSSPSKSPSRIRFISNRVGHSVQ HQQETPMSRNDGPLDHEASTVLGRLEKGNEDPETADDCVDNLSIYQDQFEKQQKPLDFEN NGRLWFPPPPDDEDDEAQNNFFTYDDEDDEIGESSAAFSSSGSLASIFPAKEKQQADHKE PLRAVVHGHFRALVLQLLQGEGINSGKEGSTDDWIDIVTSIAWQAANYVKPDTSKGGSMD PGDYVKVKCIASGSQSESTLVKGVVCTKNIKHKRMTSQYKNARLLILRGALEYQRAANQL ASFDTLLQQEKEHLKMIVSRIEAHHPNVLLVEKSVSSYAQELLLAKEISLVLNVKGPLLE RIARCTGALVTPSIDNIATTRLGHCELFHLEKVSEEHEHANQLNKKPSKTLMFFDGCPRR LGCTVLLRGSCREELKKLKKVIQYAVFAAYHLSLETSFLADEGASLPKASAALESTSADN AISAISHSAVAARAQTVANDPHVQLGSANCSVKVVLPESLLEHHYPQCGDQSNLDDCGAR DVLSTAGLENLAPFLAHDTRTVDFVEIKDQTDEGSLETLGQEESQPGELGELAKLEKSDE NKAPNEFYSAADSRQSILVSFSSRCVLNGSVCERSRLLRIKFYSSFDKPLGRYLQDDLFG QMSSCQSCKEPAEAHVICYTHQQGNLTINVRRLPSVSSLPGERDKKIWMWHRCLKCAQIE GVPPATRRVIMSDAAWGLSFGKFLELSFSNHATANRVASCGHSLQRDCLRYYGCGSMVAF FRYSPIDILSVRLPPLTLEFSGYTEQEWLRKEAAELLCKAKALYAEISSAFRRIEEKSSS LECELSDTTQLNDCIMELKELLMKEKNDYYDFLQPDDEETFDPRQAAIDILELNRLRHSL VIASHVWDRRLLSVKSFLEKSSSSVGSEDSGSCNELIDWRRDMFLKNDTLEHVYEESVPE FSDLEEYTEKALQSEQEETRVSPYGSVKIESSMLTSSESERTQEMQMEGENVVTETSLAR APSAASALSDQIDSAWTGTDRSPKKGQLFLMLQGEGSEAASFRPPSQLDFPPFRKLRSPA RVHSFDSALRLQERIRKGLPPSSLHLSTIRSFHASGDYRNMIRDPVSSVQRSYSQMSPSE AHKFNLLMGSSPSFISYASLIPDGARLMVSQGDVVVAVYDNEPTSIISYALCSKVYNDCI TDKSSVSGRGWNTSDINKEAGVAPRLSAWQSFGSLDMDYMHYGSYGSEDASSTITSLFAD SKSSPHLRVSFDDESSSAGGKVKFSVTCYFAKQFDALRRKCCPDELDFVRSLSRCKRWSA QGGKSNVYFAKSLDERFIIKQVQKTELDSFEEFAPEYFKYITDSINSRSPTCLAKVLGIF QVSVKHLKGGRETKMDLIVMENLFFERKISRVYDLKGSLRSRYNADTTGANKVLLDMNLL ETLHTKPIFLGSKAKRSLERAVWNDTSFLASVDVMDYSLLVGVDEERKELVLGIIDFMRQ YTWDKHLETWVKASGILGGLKNESPTIVSPLQYKKRFRKAMTTYFLTVPDQWSS

Transcript Sequence

Gene sequence data has not been registered.